Friday 22 December 2017

PET projects: can nature destroy plastic pollution?

One of key markers of the Anthropocene - the as yet unofficial term for a human-impacted global environment - is the deposition of manmade pollutants on land and in the oceans. A prominent component of these pollutants is plastic-based consumer waste; as I mentioned in March 2010, the UK was then using 17.5 billion plastic bags each year. Happily, the introduction of a charge on lightweight plastic shopping bags in the UK has reduced usage by a fantastic 85%. Various nations have introduced similar or even better legislation, but unfortunately in that key polluter the USA only California has had any success in overcoming corporate lobbying. The situation in Trump's America looks unlikely to change any time soon, since several states have even prohibited such bans at a county level!

Therefore, despite the best endeavours of some nations, most recently Kenya, around 80 million tonnes of polyethylene-based packaging and bags are still being produced worldwide each year. The amount that is recycled varies considerably from nation to nation, with the US Environmental Protection Agency recording only 12% of America's plastic as being recycled. As a result, it is estimated that about 12 million tonnes of plastic is annually deposited in the oceans, with even deep-sea species found to have been contaminated.

We've all seen images of beaches on the most remote, uninhabited islands smothered by tiny, multicoloured pieces of plastic, but apart from being unsightly, what are the potential dangers to the global ecosystem and humans in particular? By ingesting plastics, animals risk either choking or starving to death, or being poisoned by chemicals leaching from the material. Even if the latter doesn't quickly kill the critter (which could be anything from sea birds to turtles to baleen whales), substances such as Bisphenol A can build up in their system. In addition to the damage caused to the animals themselves, toxins can upset a species' reproductive cycle. For instance, some of the leached chemicals mimic estrogen, potentially inhibiting development of male offspring.

Of course, with such a range of species being affected, isn't it feasible that there will be knock-on effects to the human food chain? Even if there aren't obvious reductions in commercially-caught species, there is a high likelihood that wider food webs could be severely altered - and not for the good - or even that we on the verge of ingesting copious amounts of microscopic plastic particles. Even people who never eat seafood won't be able to avoid it, since animal feed may contain contaminated fishmeal.

It isn't just the obvious items that are the key pollutants, either: plastic microbeads (i.e. less than 1mm along their longest side) are prominent in rinse-off personal care products. Whoever invented them clearly has zero environmental credentials, bearing in mind there's no ability to recycle or reuse them; in fact, about 8 quadrillion microbeads get washed down the plug hole every day.  The World Trade Organisation is making some inroads into their removal - here in New Zealand their manufacture and sale will be banned by the middle of next year - but research has found they are already pretty much ubiquitous in the environment wherever these products are in use.

Therefore it makes sense to tackle the problem as soon as possible. Since some countries are reticent to implement legislation, or like China and India are having difficulties enforcing it, there is much to be said for seeking ways to degrade plastic waste in the most efficient way possible. Research over the past decade has revealed an astonishing conclusion: only about 1% of the expected amount of waste material has been found in the oceans. Either it is rapidly being buried in the sea bed, or more likely, something is breaking it down. Is this possible? Last year, a team of Japanese researchers found a microbe called Ideonella sakaiensis that is able to digest polyethylene terephthalate (PET), which is used in such mass-produced items as drink bottles. This suggests that there may be marine microorganisms with a taste for human waste, diligently destroying our plastic rubbish and preventing even worse effects on ocean life.

The Japanese research hints that it may be possible to use vats of these microbes to break down at least waste PET and then recycle it, with a much greater efficiency than is currently possible. Without interference, PET is thought to take between four hundred and one thousand years to completely degrade, presumably depending on the shape and thickness of the item. In contrast, Ideonella is able to digest the material in only six weeks. About 56 million tonnes of PET, mostly for bottles, is produced each year. Here in New Zealand, less than half of this material is recycled, the first (conventional) PET recycling plant having started work in August. So there's plenty of scope for a natural solution, should it become usable on an industrial scale.

This begs the question: are there any other critters with similar capabilities?  Last month a team at Texas Tech University reported that caterpillars of the pantry moth Plodia interpunctella have been able to thrive on polyethylene. Research showed that their digestive system contains various species of bacteria - different from the gut microbes in caterpillars that eat natural foods - which are capable of breaking down the plastic. However, what worries me is that if these microbes become selected for in the wild, will this change have the same sort of disastrous result that the inadvertent artificial selection of MRSA has had?

Some worm species are known to eat natural polymers similar to man-made plastics, such as the beeswax in hives, and so have been tested for their ability to break down plastic as well. Further research is required to determine whether the work is being done by microbes in the worms' digestive systems, but one issue with worm-digested plastic is that by-products include the toxic ethylene glycol. Apart from bacteria, Chinese researchers using plastic waste from Pakistan have found that the fungus Aspergillus tubingensis can degrade polyester polyurethane. After some years of disappointing results in mycoremediation (the use of fungi to break down man-made materials) this may prove to be a breakthrough.

The big question then is has nature done it again? After all, it does have about three and a half billion years' head start on the human race. Plastic waste is clearly a big issue and for the majority of humanity who live away from the sea (or rubbish dumps, for that matter) it's fairly easy to think "out of sight, out of mind". However, it pays to highlight the potential danger of changing ecosystems on a global scale, including the extinction of unseen and unknown species, including microbes that are vital to maintaining stability. I've previously mentioned the problems with concentrating on a few key 'poster' organisms at the expense of those that may play a pivotal role - now, or in the future - to our nutritional, pharmaceutical or technological needs. Therefore we need to be certain that the solution won't be as bad as the problem, when it comes to using nature itself to destroy the waste we unthinkingly generate. Surely a good compromise would be to minimise the amounts of plastic rubbish we generate in the first place?

Tuesday 12 December 2017

Robotic AI: key to utopia or instrument of Armageddon?

Recent surveys around the world suggest the public feel they don't receive enough science and non-consumer technology news in a format they can readily understand. Despite this, one area of STEM that captures the public imagination is an ever-growing concern with the development of self-aware robots. Perhaps Hollywood is to blame. Although there is a range of well-known cute robot characters, from WALL-E to BB-8 (both surely designed with a firm eye on the toy market), Ex Machina's Ava and the synthetic humans of the Blade Runner sequel appear to be shaping our suspicious attitudes towards androids far more than real-life projects are.

Then again, the idea of thinking mechanisms and the fears they bring out in us organic machines has been around far longer than Hollywood. In 1863 the English novelist Samuel Butler wrote an article entitled Darwin among the Machines, wherein he recommended the destruction of all mechanical devices since they would one day surpass and likely enslave mankind. So perhaps the anxiety runs deeper than our modern technocratic society. It would be interesting to see - if such concepts could be explained to them - whether an Amazonian tribe would rate intelligent, autonomous devices as dangerous. Could it be that it is the humanoid shape that we fear rather than the new technology, since R2-D2 and co. are much-loved, whereas the non-mechanical Golem of Prague and Frankenstein's monster are pioneering examples of anthropoid-shaped violence?

Looking in more detail, this apprehension appears to be split into two separate concerns:

  1. How will humans fare in a world where we are not the only species at our level of consciousness - or possibly even the most intelligent?
  2. Will our artificial offspring deserve or receive the same rights as humans - or even some animals (i.e. appropriate to their level of consciousness)?

1) Utopia, dystopia, or somewhere in the middle?

The development of artificial intelligence has had a long and tortuous history, with the top-down and bottom-up approaches (plus everything in between) still falling short of the hype. Robots as mobile mechanisms however have recently begun to catch up with fiction, gaining complete autonomy in both two- and four-legged varieties. Humanoid robots and their three principal behavioural laws have been popularised since 1950 via Isaac Asimov's I, Robot collection of short stories. In addition, fiction has presented many instances of self-aware computers with non-mobile extensions into the physical world. In both types of entity, unexpected programming loopholes prove detrimental to their human collaborators. Prominent examples include HAL 9000 in 2001: A Space Odyssey and VIKI in the Asimov-inspired feature film called I, Robot. That these decidedly non-anthropomorphic machines have been promoted in dystopian fiction runs counter to the idea above concerning humanoid shapes - could it be instead that it is a human-like personality that is the deciding fear factor?

Although similar attitudes might be expected of a public with limited knowledge of the latest science and technology (except where given the gee-whiz or Luddite treatment by the right-of-centre tabloid press) some famous scientists and technology entrepreneurs have also expressed doubts and concerns. Stephen Hawking, who appears to be getting negative about a lot of things in his old age, has called for comprehensive controls around sentient robots and artificial intelligence in general. His fears are that we may miss something when coding safeguards, leading to our unintentional destruction. This is reminiscent of HAL 9000, who became stuck in a Moebius loop after being given instructions counter to his primary programming.

Politics and economics are also a cause for concern is this area. A few months' ago, SpaceX and Tesla's Elon Musk stated that global conflict is the almost inevitable outcome of nations attempting to gain primacy in the development of AI and intelligent robots. Both Mark Zuckerberg and Bill Gates promote the opposite opinion, with the latter claiming such machines will free up more of humanity - and finances - for work that requires empathy and other complex emotional responses, such as education and care for the elderly.

All in all, there appears to be a very mixed bag of responses from sci-tech royalty. However, Musk's case may not be completely wrong: Vladimir Putin recently stated that the nation who leads AI will rule the world. Although China, the USA and India may be leading the race to develop the technology, Russia is prominent amongst the countries engaged in sophisticated industrial espionage. It may sound too much like James Bond, but clearly the dark side of international competition should not be underestimated.

There is a chance that attitudes are beginning to change in some nations, at least for those who work in the most IT-savvy professions. An online survey over the Asia Pacific region in October and November this year compiled some interesting statistics. In New Zealand and Australia only 8% of office professionals expressed serious concern about the potential impact of AI. However, this was in stark contrast to China, where 41% of interviewees claimed they were extremely concerned. India lay between these two groups at 18%. One factor these four countries had in common was the very high interest in the use of artificial intelligence to free humans from mundane tasks, with the figures here varying from 87% to 98%.

Talking of which, if robots do take on more and more jobs, what will everyone do? Most people just aren't temperamentally suited to the teaching or caring professions, so could it be that those who previously did repetitive, low-initiative tasks will be relegated to a life of enforced leisure? This appears reminiscent of the far-future, human-descended Eloi encountered by the Time Traveller in H.G. Wells' The Time Machine; some wags might say that you only have to look at a small sample of celebrity culture and social media to see that this has already happened...

Robots were once restricted to either the factory or the cinema screen, but now they are becoming integrated into other areas of society. In June this year Dubai introduced a wheeled robot policeman onto its streets, with the intention of making one quarter of the police force equally mechanical by 2030. It seems to be the case that wherever there's the potential to replace a human with a machine, at some point soon a robot will be trialling that role.

2) Robot rights or heartless humans?

Hanson Robotics' Sophia gained international fame when Saudi Arabia made her the world's first silicon citizen. A person in her own right, Sophia is usually referred to as 'she' rather than 'it' - or at least as a 'female robot' - and one who has professed the desire to have children. But would switching her off constitute murder? So far, her general level of intelligence (as opposed to specific skills) varies widely, so she's unlikely to pass the Turing test in most subjects. One thing is for certain: for an audience used to the androids of the Westworld TV series or Blade Runner 2049, Sophia is more akin to a clunky toy.

However, what's interesting here is not so much Sophia's level of sophistication as the human response to her and other contemporary human-like machines. The British tabloid press have perhaps somewhat predictably decided that the notion of robots as individuals is 'bonkers', following appeals to give rights to sexbots - who are presumably well down the intellectual chain from the cutting edge of Sophia. However, researchers at the Massachusetts Institute of Technology and officers in the US military have shown aversion to causing damage to their robots, which in the case of the latter was termed 'inhumane'. This is thought-provoking since the army's tracked robot in question bore far greater resemblance to WALL-E than to a human being.

A few months' ago I attended a talk given by New Zealand company Soul Machines, which featured a real-time chat with Rachel, one of their 'emotionally intelligent digital humans'. Admittedly Rachel is entirely virtual, but her ability to respond to words (both the tone in which they are said as well as their meaning) as well as to physical and facial gestures, presented an uncanny facsimile of human behaviour. Rachel is a later version of the AI software that was first showcased in BabyX, who easily generated feelings of sympathy when she became distraught. BabyX is perhaps the first proof that we are well on the way to creating a real-life version of David, the child android in Spielberg's A.I. Artificial Intelligence; robots may soon be able to generate powerful, positive emotions in us.

Whilst Soul Machines' work is entirely virtual, the mechanical shell of Sophia and other less intelligent bipedal robots shows that the physical problem of subtle, independent movement has been almost solved. This begs the question, when Soul Machines' 'computational model of consciousness' is fully realised, will we have any choice but to extend human rights to them, regardless of whether these entities have mechanical bodies or only exist on a computer screen?

To some extent, Philip K. Dick's intention in Do Androids Dream of Electric Sheep? to show that robots will always be inferior to humans due to their facsimile emotions was reversed by Blade Runner and its sequel. Despite their actions, we felt sorry for the replicants since although they were capable of both rational thought and human-like feelings, they were treated as slaves. The Blade Runner films, along with the Cylons of the Battlestar Galactica reboot, suggest that it is in our best interest to discuss robot rights sooner rather than later, both to prevent the return of slavery (albeit of an organic variety) and to limit a prospective AI revolution. It might sound glib, but any overly-rational self-aware machine might consider itself the second-hand product of natural selection and therefore the successor of humanity. If that is the case, then what does one do with an inferior predecessor that is holding it up its true potential?

One thing for certain is that AI robot research is unlikely to be slowing down any time soon. China is thought to be on the verge of catching up with the USA whilst an Accenture report last year suggested that within the next two decades the implementation of such research could add hundreds of billions of dollars to the economies of participating nations. Perhaps for peace of mind AI manufacturers should follow the suggestion of a European Union draft report from May 2016, which recommended an opt-out mechanism, a euphemistic name for a kill switch, to be installed in all self-aware entities. What with human fallibility and all, isn't there a slight chance that a loophole could be found in Asimov's Three Laws of Robotics, after which we find out if we have created partners or successors..?

Tuesday 28 November 2017

Research without borders: why international cooperation is good for STEM

I've just finished reading Bryan Sykes' (okay, I know he's a bit controversial) The Seven Daughters of Eve, about the development of mitochondrial DNA research for population genetics. One chapter mentioned Dr Sykes' discovery of the parallel work of Hans-Jürgen Bandelt, who's Mathematics Genealogy Project provided a structure diagram perfectly suited to explaining Sykes' own evolutionary branching results. This discovery occurred largely by chance, suggesting that small research groups must rely either on serendipity or have knowledge of the latest professional papers in order to find other teams who's work might be useful.

This implies that the more international the character of scientific and technological research, the more likely there will be such fortuitous occurrences. Britain's tortuous path out of the European Union has led various organisations on both sides of the Channel to claim that this can only damage British STEM research. The Francis Crick Institute, a London-based biomedical research centre that opened last year, has staff originating from over seventy nations. This size and type of establishment cannot possibly rely on being supplied with researchers from just one nation. Yet EU scientists resident in Britain have felt 'less welcome' since the Brexit referendum, implying a potential loss of expertise in the event of a mass withdrawal.

In recent years, European Union research donations to the UK have exceeded Britain's own contributions by £3 billion, meaning that the additional £300 million newly announced for research and development over the coming four years is only ten percent of what the EU has provided - and the UK Government is clearly looking to the private sector to make up the shortfall. It should also be recognised that although there are high numbers of non-British nationals working in Britain's STEM sector, the country also has a fair number of its own STEM professionals working overseas in EU nations.

The United Kingdom is home to highly expensive, long-term projects that require overseas funding and expertise, including the Oxfordshire-based Joint European Torus nuclear fusion facility. British funding and staff also contribute to numerous big-budget international projects, from the EU-driven Copernicus Earth observation satellite programme to the non-EU CERN. The latter is best-known for the Large Hadron Collider, the occasional research home of physicist and media star Brian Cox (how does he find the time?) and involves twenty-two key nations plus researchers from more than eighty other countries. Despite the intention to stay involved in at least the non-EU projects, surveys suggest that post-Brexit there will be greater numbers of British STEM professionals moving abroad. Indeed, in the past year some American institutions have actively pursued the notion of recruiting more British scientists and engineers.

Of course, the UK is far from unique in being involved in so many projects requiring international cooperation. Thirty nations are collaborating on the US-based Deep Underground Neutrino Experiment (DUNE); the recently-successful Laser Interferometer Gravitational-Wave Observatory (LIGO) involves staff from eighteen countries; and the Square Kilometre Array radio telescope project utilises researchers of more than twenty nationalities. Although the USA has a large population when compared to European nations, one report from 2004 states that approaching half of US physicists were born overseas. Clearly, these projects are deeply indebted to non-nationals.

It isn't just STEM professionals that rely on journeying cross-border, either. Foreign science and technology students make up considerable percentages in some developed countries: in recent years, over 25% of the USA's STEM graduate students and even higher numbers of its master's degree and doctorate students were not born there. Canada, Australia, New Zealand and several European countries have similar statistics, with Indian and Chinese students making up a large proportion of those studying abroad.

As a small nation with severely limited resources for research, New Zealand does extremely well out of the financial contributions from foreign students. Each PhD student spends an average of NZ$175,000 on fees and living costs, never mind additional revenue from the likes of family holidays, so clearly the economics alone make sense. Non-nationals can also introduce new perspectives and different approaches, potentially lessening inflexibility due to cultural mind sets. In recent years, two New Zealand-based scientists, microbiologist Dr Siouxsie Wiles and nanotechnologist Dr Michelle Dickinson (A.K.A. Nanogirl) have risen to prominence thanks to their fantastic science communication work, including with children. Both were born in the UK, but New Zealand sci-comm would be substantially poorer without their efforts. Could it be that their sense of perspective homed in on a need that locally-raised scientists failed to recognise?

This combination of open borders for STEM professionals and international collaboration on expensive projects proves if anything that science cannot be separated from society as a whole. Publically-funded research requires not only a government willing to see beyond its short-term spell in office but a level of state education that satisfies the general populace as to why public money should be granted for such undertakings. Whilst I have previously discussed the issues surrounding the use of state funding for mega-budget research with no obvious practical application, the merits of each project should still be discussed on an individual basis. In addition, and as a rule of thumb, it seems that the larger the project, the almost certain increase in the percentage of non-nationals required to staff it.

The anti-Brexit views of prominent British scientists such as Brian Cox and the Astronomer Royal, Lord Rees of Ludlow, are well known. Let's just hope that the rising xenophobia and anti-immigration feeling that led to Brexit doesn't stand for 'brain exit'. There's been enough of that already and no nation - not even the USA - has enough brain power or funding to go it alone on the projects that really need prompt attention (in case you're in any doubt, alternative energy sources and climate change mitigation spring to mind). Shortly before the Brexit referendum, Professor Stephen Hawking said: "Gone are the days when we could stand on our own, against the world. We need to be part of a larger group of nations." Well if that's not obvious, I don't know what is!