Monday 29 October 2018

Space is the place: did life begin in the cosmic void?

A few weeks' ago I was watching a television documentary about the search for intelligence aliens and featuring the usual SETI experts Jill Tarter and Seth Shostak when I realised that we rarely see any crossover with research into non-intelligent extra-terrestrial life. Whereas the former is often seen by outsiders as pie-in-the-sky work by idealistic dreamers, the latter has more of a down-to-Earth feel about it, even though it has at times also suffered from a lack of credibility.

Based on current thinking, it seems far more probable that life in the universe will mostly be very small and entirely lacking consciousness, in other words, microbial. After all, life on Earth arose pretty much as soon as the environment was stable enough, around 3.7 billion years ago or even earlier. In contrast, lifeforms large enough to be visible without a microscope evolved around 1 billion or so years ago (for photosynthetic plants) and only about 580 million years ago for complex marine animals.

The recent publicity surrounding the seasonal variations in methane on Mars has provided ever more tantalising hints that microbial life may survive in ultraviolet-free shelters near the Martian surface, although it will be some years before a robot mission sophisticated enough to visit sink holes or canyon walls can investigate likely habitats. (As for the oft-talked about but yet to be planned crewed mission, see this post from 2015.)

Therefore it seems that it is worth concentrating on finding biological or pre-biological compounds in extra-terrestrial objects as much as listening for radio signals. The search can be via remote sensing (e.g. of molecular clouds, comets and asteroids) as well as investigating meteorites - bearing in mind that the Earth receives up to one million kilogrammes of material per day, although less than one percent is large enough to be identified as such.

The problem is that this area of research has at times had a fairly poor reputation due to the occasional premature claim of success. Stories then become widespread via non-specialist media in such a way that the resulting hype frequently bears little relation to the initial scientific report. In addition, if further evidence reverses that conclusion, the public's lack of understanding of the error-correcting methods of science leads to disillusion at best and apathy at worst.

One key hypothesis that has received more than its fair share of negative publicity has been that of panspermia, which suggests not just the chemicals of biology but life itself has been brought to Earth by cosmic impactors. The best known advocates are Fred Hoyle and Chandra Wickramasinghe, but their outspoken championing of an hypothesis severely lacking in evidence has done little to promote the idea. For while it is feasible - especially with the ongoing discovery of extremophiles everywhere from deep ocean vents to the coolant ponds of nuclear reactors - to envisage microbial life reaching Earth from cometary or asteroid material, the notion that these extra-terrestrials have been responsible for various epidemics seems to be a step too far.

It's long been known that comets contain vast amounts of water; indeed, simulations suggest that until the Late Heavy Bombardment around four billion years ago there may have been far less water on Earth than subsequently. Considering the volumes of water ice now being discovered on Mars and the Moon, the probability of life-sustaining environments off the Earth has gained a respectable boost.

It isn't just water, either: organic compounds that are precursors to biological material have been found in vast quantities in interstellar space; and now they are being found in the inner solar system too. That's not to say that this research has been without controversy as well. Since the early 1960s, Bartholomew Nagy has stirred debate by announcing the discovery of sophisticated pre-biological material in impactors such as the Orgueil meteorite. Examination by other teams has found that contamination has skewed the results, implying that Nagy's conclusions were based on inadequate research. Although more recent investigation of meteorites and spectrophotometry of carbonaceous chondrite asteroids have supplied genuine positives, the earlier mistakes have sullied the field.

Luckily, thorough examination of the Australian Murchison meteorite has promoted the discipline again, with numerous amino acids being confirmed as of non-terrestrial origin. The RNA nucleobase uracil has also been found in the Murchison meteorite, with ultraviolet radiation in the outer space vacuum being deemed responsible for the construction of these complex compounds.

Not that there haven't been other examples of premature results leading to unwarranted hype. Perhaps the best known example of this was the 1996 announcement of minute bacteria-like forms in the Martian ALH84001 meteorite. The international headlines soon waned when a potential non-biological origin was found.

In addition to examination of these objects, experiments are increasingly being performed to test the resilience of life forms in either vacuum chambers or real outer space, courtesy of the International Space Station. After all, if terrestrial life can survive in such a hostile environment, the higher the likelihood that alien microbiology could arrive on Earth via meteorite impact or cometary tail (and at least one amino acid, glycine, has been found on several comets).

Unmanned probes are now replicating these findings, with the European Space Agency's Rosetta spacecraft finding glycine in the dust cloud around Comet 67P/Churyumov-Gerasimenko in 2016. Although these extra-terrestrial objects may lack the energy source required to kick-start life itself, some are clearly harbouring many of the complex molecules used in life on Earth.

It has now been proven beyond any doubt that organic and pre-biological material is common in space. The much higher frequency of impacts in the early solar system suggests that key components of Earth's surface chemistry - and its water - were delivered via meteorites and comets. Unfortunately, the unwary publication of provisional results, when combined with the general public's feeble grasp of scientific methodology, has hindered support for what is surely one of the most exciting areas in contemporary science. A multi-faceted approach may in time supply the answers to the ultimate questions surrounding the origin of life and its precursor material. This really is a case of watch (this) space!

Thursday 11 October 2018

Sonic booms and algal blooms: a smart approach to detoxifying waterways

A recent report here in New Zealand has raised some interesting issues around data interpretation and the need for independent analysis to minimise bias. The study has examined the state of our fresh water environment over the past decade, leading to the conclusion that our lakes and rivers are improving in water quality.

However, some of the data fails to support this: populations of freshwater macro invertebrates remain low, following a steady decline over many decades. Therefore while the overall tone of the report is one of optimism, some researchers have claimed that the data has been deliberately cherry-picked in order to present as positive a result as possible.

Of course, there are countless examples of interested parties skewing scientific data for their own ends, with government organisations and private corporations among the most common culprits. In this case, the recorded drop in nitrate levels has been promoted at the expense of the continued low population of small-scale fauna. You might well ask what use these worms, snails and insects are, but even a basic understanding of food webs shows that numerous native bird and freshwater fish species rely on these invertebrates for food. As I've mentioned so often the apparently insignificant may play a fundamental role in sustaining human agriculture (yes, some other species practice farming too!)

So what is it that is preventing the invertebrates' recovery? The answer seems to be an increase in photosynthetic cyanobacteria, or as is more commonly - and incorrectly known - blue-green algae. If it is identified at all, it's as a health food supplement called spirulina, available in smoothies and tablet form. However, most cyanobacteria species are not nearly as useful - or pleasant. To start with, their presence in water lowers the oxygen content, so thanks to fertiliser runoff - nitrogen and phosphorus in particular - they bloom exponentially wherever intensive farming occurs close to fresh water courses. Another agriculture-related issue is due to clearing the land for grazing: without trees to provide shade, rivers and streams grow warmer, encouraging algal growth. Therefore as global temperatures rise, climate change is having yet another negative effect on the environment.

Most species of cyanobacteria contain toxins that can severely affect animals much larger than fresh water snails. Dogs have been reported as dying in as little as a quarter of an hour from eating it, with New Zealand alone losing over one hundred and fifty pet canines in the past fifteen years; it's difficult to prevent consumption, since dogs seem to love the smell! Kiwis are no stranger to the phylum for other reasons, as over one hundred New Zealand rivers and lakes have been closed to swimmers since 2011 due to cyanobacterial contamination.

Exposure to contaminated water or eating fish from such an environment is enough to cause external irritation to humans and may even damage our internal organs and nervous system. Drinking water containing blue-green algae is even worse; considering their comparable size to some dogs, it is supposed that exposure could prove fatal to young children. Research conducted over the past few years also suggests that high-level contamination can lead to Lou Gehrig's disease, A.K.A. amyotrophic lateral sclerosis, the same condition that Stephen Hawking suffered from.

What research you might ask is being done to discover a solution to this unpleasant organism? Chemicals additives including copper sulphate and calcium hypochlorite have been tried, but many are highly expensive while the toxicity of others is such that fish and crustacean populations also suffer, so this is hardly a suitable answer.

A more elegant solution has been under trial for the past two years, namely the use of ultrasound to sink the blue-green algae too deep to effectively photosynthesise, thus slowly killing it. A joint programme between New Zealand and the Netherlands uses a high-tech approach to identifying and destroying ninety per cent of each bloom. Whereas previous ultrasonic methods tended to be too powerful, thereby releasing algal toxins into the water, the new technique directly targets the individual algal species. Six tests per hour are used to assess water quality and detect the species to be eradicated. Once identified, the sonic blasts are calibrated for the target species and water condition, leading to a slower death for the blue-green algae that avoids cell wall rupture and so prevents the toxins from escaping.

Back to the earlier comment as to why the report's conclusions appear to have placed a positive spin that is unwarranted, the current and previous New Zealand Governments have announced initiatives to clean up our environment and so live up to the tourist slogan of '100% Pure'. The latest scheme requires making ninety percent of the nation's fresh water environments swimmable by 2040, which seems to be something of a tall order without radical changes to agriculture and the heavily polluting dairy sector in particular. Therefore the use of finely target sonic blasting couldn't come a moment too soon.

Our greed and short-sightedness has allowed cyanobacteria to greatly increase at the expense of the freshwater ecosystem, not to mention domesticated animals. Now advanced but small-scale technology has been developed to reduce it to non-toxic levels, but is yet to be implemented beyond the trial stage. Hopefully this eradication method will become widespread in the near future, a small victory in our enormous fight to right the wrongs of over-exploitation of the environment. But as with DDT, CFCs and numerous others, it does make me wonder how many more man-made time bombs could be ticking out there...